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1. gersteinlab/MolLM gersteinlab/MolLM Public

   A Unified Language Model to Integrate Biomedical Text with 2D and 3D Molecular Representations

   Python 25 1

2. DynamicMLTrainer DynamicMLTrainer Public

   Automatically partition PyTorch models onto your GPU network topology for full model parallelism & pipelining.

   Python 1

3. LatentProtein LatentProtein Public

   Multi-modal biological reasoning large language model for tasks across proteins, RNA, DNA, and small molecules.

   Python

4. GraphCPA GraphCPA Public

   Predicting gene expression for single cell perturbation with small molecules using a computational perturbational auto encoder (CPA) and graph neural network (GNN).

   Jupyter Notebook 2

5. KeyboardVideoToText KeyboardVideoToText Public

   Creating a model to predict the text typed from an overhead video of typing on a keyboard.

   Python

6. NeuralClippingSearch NeuralClippingSearch Public

   Bayesian optimization for discovering adaptive gradient clipping functions that improve convergence in DP-SGD

   Python